Start the application either by clicking on "Start Application" or download it and start with
java -jar sbg.jarin a terminal.
This application takes a set of blast output of the following format
Column | Name |
---|---|
0 | query name |
1 | subject name |
2 | percent identities |
3 | aligned length |
4 | number of mismatched positions |
5 | number of gap positions |
6 | query sequence start |
7 | query sequence end |
8 | subject sequence start |
9 | subject sequence end |
10 | e-value |
11 | bit score |
Example
SAM50_AMEBA SAM50_AMEBA 100.00 118 0 0 1 118 1 118 9e-67 243 SAM50_AMEBA gi|126338997|ref|XP_001362470.1| 29.66 118 70 4 3 115 151 260 4e-09 52.4 SAM50_AMEBA gi|114686851|ref|XP_001172164.1| 28.81 118 71 4 3 115 72 181 1e-08 50.8