Uni Münster Med. Fakultaet
IoB

Welcome to Bioinformatics 1 web page

This page is dedicated to Bioinformatics 1 course taught in winter semester 2011. The lectures will start on October 20th, at 10:00 sharp. Location: Institute of Botany lecture hall (SBI HS), Schlossgarten 3.

Prof. Kudla - Grundlagen der Genomik

Scripte: auf der Website der AG Kudla unter "teaching", siehe hier auf der rechten Seite unter "Downloads" oder direkt hier

Login: kurs
Passwort: mars

Die Scripte bitte VOR der Vorlesung herunterladen. Es stehen für jede Vorlesung drei inhaltlich identische Versionen im Netz:

  1. 2 Folien pro Seite bunt (zum Anschauen)
  2. 2 Folien pro Seite schwarz-weis (zum Ausdrucken)
  3. 6 Folien pro Seite schwarz-weis (sparsame Druckversion)

Lecturers

Prof. Wojciech Makalowski; office hours: Tuesday 5:00 - 7:00 PM (Niels Stensen Strasse 14)

Prof. Claudia Aquisti; office hours: Wednesday 3:00 - 5:00 PM (Hüfferstrasse 1)

Instructors

Jasmin Dröge; office hours: Monday 3:00 - 5:00 PM (Niels Stensen Strasse 14)

Jessin Janice; office hours: Friday 12:00 - 2:00 PM (Niels Stensen Strasse 14)

Amit Pande: office hours: Wednesday 3:00 - 5:00 PM (Niels Stensen Strasse 14)

Kathrin Poos; office hours: Thursday 3:00 - 5:00 PM (Niels Stensen Strasse 12)

Stefanie Henze; office hours: Thursday 3:00 - 5:00 PM (Hüfferstrasse 1)

K. Parijat Tripathi; office hours: Thursday 4:00 - 6:00 PM (Hüfferstrasse 1)

Syllabus

Date Topic Handouts

10-20-2011

Introduction to bioinformatics from an evolutionary perspective

[Slides]

10-27-2011

Principles of heredity. Mutations, substitutions and polymorphisms

[Slides]

11-03-2011

Distances and models. Synonymous and non-synonymous substitutions. Basics of the neutral theory.

[Slides]

11-10-2011

Sequence alignment and similarity search

[Slides]

11-17-2011

Gene prediction

[Slides]  

11-24-2011

Phylogenetic inference

[Slides]  

12-01-2011

Protein analyses

[Slides]  

Practicals - computer lab

Week Topic Instructors

11-14-2011

Sequence alignments and BLAST

J. Janice, K. Poos,

11-21-2011

Gene prediction

J. Droege, A. Pande

11-28-2011

Phylogenetic inference

S. Henze, K. P. Tripathi

Download sequence for phylogenetic analysis from here

Registration here

Recommended textbooks

Please note that there is no specific textbook that we follow but these two books cover all the material plus some extras.

2011-11-29 19:12